Dedicated to “whole genome assembly-free & reference-free” treatments, the Colib’read project designs algorithms for NGS analyses. Colib’read developed tools are designed for:
- Variant calling (SNPs, indels, Alternative splicing)
- Read set comparisons
- Long read correction
All developed tools need only raw read sets to be used, no reference genome is required. However, a reference genome may be used, bringing additional pieces of information to proposed results.
Special care was given to limit both the memory and time requirements of all tools.